Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
VTNP04004 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
VTNP04004 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.35■□□□□ 0.21
VTNP04004 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 MIR769-201ENST00000390225 118 ntBASIC16.34■□□□□ 0.21
VTNP04004 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
VTNP04004 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.34■□□□□ 0.21
VTNP04004 AL662890.1-201ENST00000396818 632 ntBASIC16.34■□□□□ 0.21
VTNP04004 ACTG1P2-201ENST00000415776 1125 ntBASIC16.34■□□□□ 0.21
VTNP04004 ACTG1P11-201ENST00000425411 1125 ntBASIC16.34■□□□□ 0.21
VTNP04004 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 CICP12-201ENST00000455801 843 ntBASIC16.34■□□□□ 0.21
VTNP04004 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 RN7SL11P-201ENST00000471305 293 ntBASIC16.34■□□□□ 0.21
VTNP04004 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.34■□□□□ 0.21
VTNP04004 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.34■□□□□ 0.21
VTNP04004 RN7SL774P-201ENST00000577467 290 ntBASIC16.34■□□□□ 0.21
VTNP04004 AC008825.2-201ENST00000603374 718 ntBASIC16.34■□□□□ 0.21
VTNP04004 AC091544.8-201ENST00000619490 361 ntBASIC16.34■□□□□ 0.21
VTNP04004 AC138627.1-207ENST00000641560 1006 ntBASIC16.34■□□□□ 0.21
VTNP04004 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
VTNP04004 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
VTNP04004 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.34■□□□□ 0.21
VTNP04004 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
VTNP04004 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VTNP04004 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.33■□□□□ 0.21
VTNP04004 MBLAC2-202ENST00000514906 1936 ntBASIC16.33■□□□□ 0.21
VTNP04004 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VTNP04004 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
VTNP04004 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
VTNP04004 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
VTNP04004 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
VTNP04004 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.33■□□□□ 0.2
VTNP04004 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 AC005962.1-201ENST00000584100 773 ntBASIC16.33■□□□□ 0.2
VTNP04004 AC008805.1-201ENST00000590892 364 ntBASIC16.33■□□□□ 0.2
VTNP04004 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 BX088702.1-201ENST00000610784 235 ntBASIC16.33■□□□□ 0.2
VTNP04004 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.33■□□□□ 0.2
VTNP04004 AP001505.2-201ENST00000616815 443 ntBASIC16.33■□□□□ 0.2
VTNP04004 AL008718.2-201ENST00000609206 1313 ntBASIC16.33■□□□□ 0.2
VTNP04004 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC16.33■□□□□ 0.2
VTNP04004 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 NFIC-211ENST00000641145 8399 ntBASIC16.33■□□□□ 0.2
VTNP04004 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 AC006486.2-201ENST00000624246 2199 ntBASIC16.33■□□□□ 0.2
VTNP04004 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
VTNP04004 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
VTNP04004 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
VTNP04004 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms