Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC211476.1-201ENST00000503899 468 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.24□□□□□ -0.13
MT-ND1P03886 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 MIR4453-201ENST00000584019 89 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 MIR6080-201ENST00000617359 66 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 AP001059.3-201ENST00000619053 235 ntBASIC14.24□□□□□ -0.13
MT-ND1P03886 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.24□□□□□ -0.13
MT-ND1P03886 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.24□□□□□ -0.13
MT-ND1P03886 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.24□□□□□ -0.13
MT-ND1P03886 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
MT-ND1P03886 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.23□□□□□ -0.13
MT-ND1P03886 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.23□□□□□ -0.13
MT-ND1P03886 AC022447.6-201ENST00000515522 438 ntBASIC14.23□□□□□ -0.13
MT-ND1P03886 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
MT-ND1P03886 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 AL354702.1-201ENST00000442006 1960 ntBASIC14.23□□□□□ -0.13
MT-ND1P03886 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.23□□□□□ -0.13
MT-ND1P03886 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.23□□□□□ -0.13
MT-ND1P03886 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
MT-ND1P03886 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
MT-ND1P03886 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
MT-ND1P03886 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.22□□□□□ -0.13
MT-ND1P03886 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
MT-ND1P03886 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms