Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC13.38□□□□□ -0.27
APOC1P02654 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 AC138649.4-201ENST00000612222 287 ntBASIC13.38□□□□□ -0.27
APOC1P02654 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 AL158212.4-201ENST00000624062 1286 ntBASIC13.38□□□□□ -0.27
APOC1P02654 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC1P02654 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC1P02654 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOC1P02654 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 AC022144.1-201ENST00000602255 1580 ntBASIC13.37□□□□□ -0.27
APOC1P02654 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 CICP8-201ENST00000455800 2813 ntBASIC13.37□□□□□ -0.27
APOC1P02654 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.37□□□□□ -0.27
APOC1P02654 BASP1P1-201ENST00000430708 665 ntBASIC13.37□□□□□ -0.27
APOC1P02654 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.37□□□□□ -0.27
APOC1P02654 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.37□□□□□ -0.27
APOC1P02654 RARRES2P5-201ENST00000564013 466 ntBASIC13.37□□□□□ -0.27
APOC1P02654 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 SRD5A3P1-201ENST00000603021 949 ntBASIC13.37□□□□□ -0.27
APOC1P02654 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.37□□□□□ -0.27
APOC1P02654 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APOC1P02654 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
APOC1P02654 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC1P02654 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC1P02654 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
APOC1P02654 AL031595.1-201ENST00000623969 4709 ntBASIC13.37□□□□□ -0.27
APOC1P02654 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC1P02654 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC1P02654 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.36□□□□□ -0.27
APOC1P02654 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms