Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SMC2O95347 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.04■□□□□ 0.32
SMC2O95347 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.04■□□□□ 0.32
SMC2O95347 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SMC2O95347 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.04■□□□□ 0.32
SMC2O95347 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.04■□□□□ 0.32
SMC2O95347 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.04■□□□□ 0.32
SMC2O95347 AC009407.1-201ENST00000568958 598 ntBASIC17.04■□□□□ 0.32
SMC2O95347 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.04■□□□□ 0.32
SMC2O95347 AP001160.2-201ENST00000596071 487 ntBASIC17.04■□□□□ 0.32
SMC2O95347 AL391069.4-201ENST00000609583 481 ntBASIC17.04■□□□□ 0.32
SMC2O95347 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.04■□□□□ 0.32
SMC2O95347 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
SMC2O95347 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 ADAMTS7P1-201ENST00000613213 4793 ntBASIC17.04■□□□□ 0.32
SMC2O95347 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 CLK3P2-201ENST00000427566 1453 ntBASIC17.04■□□□□ 0.32
SMC2O95347 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 AL157414.3-201ENST00000624276 1954 ntBASIC17.04■□□□□ 0.32
SMC2O95347 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMC2O95347 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.04■□□□□ 0.32
SMC2O95347 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 AC135586.1-201ENST00000539323 574 ntBASIC17.03■□□□□ 0.32
SMC2O95347 AC036164.1-201ENST00000570544 333 ntBASIC17.03■□□□□ 0.32
SMC2O95347 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.03■□□□□ 0.32
SMC2O95347 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SMC2O95347 SRD5A3P1-201ENST00000603021 949 ntBASIC17.03■□□□□ 0.32
SMC2O95347 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.03■□□□□ 0.32
SMC2O95347 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC17.03■□□□□ 0.32
SMC2O95347 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SMC2O95347 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SMC2O95347 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.02■□□□□ 0.32
SMC2O95347 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SMC2O95347 AC093525.8-201ENST00000624099 1342 ntBASIC17.02■□□□□ 0.32
SMC2O95347 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SMC2O95347 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms