Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 HOMER2P2-201ENST00000451621 847 ntBASIC15.86■□□□□ 0.13
RTN3O95197 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.86■□□□□ 0.13
RTN3O95197 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.86■□□□□ 0.13
RTN3O95197 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.86■□□□□ 0.13
RTN3O95197 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.86■□□□□ 0.13
RTN3O95197 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.86■□□□□ 0.13
RTN3O95197 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 AC009542.2-202ENST00000619004 1067 ntBASIC15.86■□□□□ 0.13
RTN3O95197 AC138466.3-201ENST00000619983 221 ntBASIC15.86■□□□□ 0.13
RTN3O95197 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.86■□□□□ 0.13
RTN3O95197 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 AP000845.1-201ENST00000581677 2131 ntBASIC15.86■□□□□ 0.13
RTN3O95197 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
RTN3O95197 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
RTN3O95197 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
RTN3O95197 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 ACTBP11-201ENST00000436287 1126 ntBASIC15.85■□□□□ 0.13
RTN3O95197 CNN2P10-201ENST00000443067 918 ntBASIC15.85■□□□□ 0.13
RTN3O95197 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.85■□□□□ 0.13
RTN3O95197 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 COX5BP1-201ENST00000507622 393 ntBASIC15.85■□□□□ 0.13
RTN3O95197 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.85■□□□□ 0.13
RTN3O95197 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 C2orf69P2-201ENST00000562032 1123 ntBASIC15.85■□□□□ 0.13
RTN3O95197 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 CLUHP2-201ENST00000426660 1303 ntBASIC15.85■□□□□ 0.13
RTN3O95197 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
RTN3O95197 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.85■□□□□ 0.13
RTN3O95197 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.85■□□□□ 0.13
RTN3O95197 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.84■□□□□ 0.13
RTN3O95197 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
RTN3O95197 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RTN3O95197 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms