Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.73□□□□□ -0.21
CLPXO76031 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.73□□□□□ -0.21
CLPXO76031 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC13.73□□□□□ -0.21
CLPXO76031 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLPXO76031 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.73□□□□□ -0.21
CLPXO76031 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLPXO76031 TNN-202ENST00000621086 4234 ntTSL 5 BASIC13.72□□□□□ -0.21
CLPXO76031 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLPXO76031 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.72□□□□□ -0.21
CLPXO76031 PMS2P4-201ENST00000412466 1052 ntBASIC13.72□□□□□ -0.21
CLPXO76031 AC254562.1-201ENST00000417586 456 ntBASIC13.72□□□□□ -0.21
CLPXO76031 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.72□□□□□ -0.21
CLPXO76031 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.72□□□□□ -0.21
CLPXO76031 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.72□□□□□ -0.21
CLPXO76031 KRT19P2-202ENST00000557173 1012 ntBASIC13.72□□□□□ -0.21
CLPXO76031 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.72□□□□□ -0.21
CLPXO76031 C20orf181-201ENST00000623918 480 ntBASIC13.72□□□□□ -0.21
CLPXO76031 AC004877.2-201ENST00000623941 599 ntBASIC13.72□□□□□ -0.21
CLPXO76031 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.72□□□□□ -0.21
CLPXO76031 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CLPXO76031 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.72□□□□□ -0.21
CLPXO76031 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 AC131902.2-201ENST00000566892 2172 ntBASIC13.72□□□□□ -0.21
CLPXO76031 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CLPXO76031 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLPXO76031 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.72□□□□□ -0.21
CLPXO76031 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CLPXO76031 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLPXO76031 KRT18P28-201ENST00000453838 1332 ntBASIC13.71□□□□□ -0.21
CLPXO76031 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.71□□□□□ -0.21
CLPXO76031 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.71□□□□□ -0.21
CLPXO76031 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
CLPXO76031 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 HMGA1P7-201ENST00000406908 502 ntBASIC13.71□□□□□ -0.21
CLPXO76031 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLPXO76031 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.71□□□□□ -0.21
CLPXO76031 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.71□□□□□ -0.21
CLPXO76031 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.71□□□□□ -0.21
CLPXO76031 MKNK2P1-201ENST00000437526 628 ntBASIC13.71□□□□□ -0.21
CLPXO76031 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.71□□□□□ -0.21
CLPXO76031 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.71□□□□□ -0.21
CLPXO76031 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.71□□□□□ -0.21
CLPXO76031 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CLPXO76031 PDPK2P-202ENST00000562415 1191 ntBASIC13.71□□□□□ -0.21
CLPXO76031 SNHG9-202ENST00000564014 471 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms