Protein–RNA interactions for Protein: O75439

PMPCB, Mitochondrial-processing peptidase subunit beta, humanhuman

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCBO75439 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 AC018665.1-201ENST00000622927 1362 ntBASIC15.28■□□□□ 0.04
PMPCBO75439 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.28■□□□□ 0.04
PMPCBO75439 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PMPCBO75439 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PMPCBO75439 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.28■□□□□ 0.04
PMPCBO75439 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 AC012441.1-201ENST00000446669 685 ntBASIC15.28■□□□□ 0.04
PMPCBO75439 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.28■□□□□ 0.04
PMPCBO75439 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 AC068587.3-201ENST00000526613 355 ntBASIC15.28■□□□□ 0.04
PMPCBO75439 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.28■□□□□ 0.04
PMPCBO75439 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
PMPCBO75439 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
PMPCBO75439 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PMPCBO75439 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 AC140479.7-201ENST00000636301 2332 ntBASIC15.28■□□□□ 0.04
PMPCBO75439 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
PMPCBO75439 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC15.28■□□□□ 0.04
PMPCBO75439 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PMPCBO75439 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PMPCBO75439 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 AC007292.2-201ENST00000593524 1812 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PMPCBO75439 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 AC007389.4-201ENST00000454674 793 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.27■□□□□ 0.04
PMPCBO75439 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 AC132938.2-201ENST00000579188 680 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
PMPCBO75439 AC004466.1-201ENST00000599515 1080 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 AC145423.3-201ENST00000615987 467 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PMPCBO75439 AL591163.1-201ENST00000641757 987 ntBASIC15.27■□□□□ 0.04
PMPCBO75439 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms