Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 AL136172.1-201ENST00000598590 1394 ntBASIC15.17■□□□□ 0.02
PRAMEF11O60813 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 AL355994.2-201ENST00000447882 704 ntBASIC15.17■□□□□ 0.02
PRAMEF11O60813 RNA5SP412-201ENST00000516234 123 ntBASIC15.17■□□□□ 0.02
PRAMEF11O60813 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 NAA38-206ENST00000576384 424 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PRAMEF11O60813 AC092135.3-201ENST00000624151 1846 ntBASIC15.17■□□□□ 0.02
PRAMEF11O60813 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.17■□□□□ 0.02
PRAMEF11O60813 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 AL358472.3-201ENST00000608147 415 ntBASIC15.16■□□□□ 0.02
PRAMEF11O60813 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.16■□□□□ 0.02
PRAMEF11O60813 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PRAMEF11O60813 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AC106881.1-201ENST00000605849 3329 ntBASIC15.15■□□□□ 0.02
PRAMEF11O60813 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AC063926.3-201ENST00000624734 5658 ntBASIC15.15■□□□□ 0.02
PRAMEF11O60813 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AL354702.1-201ENST00000442006 1960 ntBASIC15.15■□□□□ 0.02
PRAMEF11O60813 NFIC-211ENST00000641145 8399 ntBASIC15.15■□□□□ 0.02
PRAMEF11O60813 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 FAM21FP-201ENST00000426241 1131 ntBASIC15.15■□□□□ 0.02
PRAMEF11O60813 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PRAMEF11O60813 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PRAMEF11O60813 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PRAMEF11O60813 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms