Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
HCN1O60741 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 C1QBPP1-201ENST00000400117 770 ntBASIC14.12□□□□□ -0.15
HCN1O60741 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 AC112492.5-201ENST00000421897 457 ntBASIC14.12□□□□□ -0.15
HCN1O60741 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 AC120045.2-201ENST00000567334 178 ntBASIC14.12□□□□□ -0.15
HCN1O60741 AC124283.3-201ENST00000570869 594 ntBASIC14.12□□□□□ -0.15
HCN1O60741 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 BTNL10-201ENST00000595971 695 ntBASIC14.12□□□□□ -0.15
HCN1O60741 AC008735.3-201ENST00000596646 500 ntBASIC14.12□□□□□ -0.15
HCN1O60741 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.12□□□□□ -0.15
HCN1O60741 MIR6805-201ENST00000615055 62 ntBASIC14.12□□□□□ -0.15
HCN1O60741 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.12□□□□□ -0.15
HCN1O60741 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HCN1O60741 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HCN1O60741 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.12□□□□□ -0.15
HCN1O60741 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 AC234783.1-201ENST00000441761 496 ntBASIC14.11□□□□□ -0.15
HCN1O60741 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 VDAC1P7-201ENST00000462417 847 ntBASIC14.11□□□□□ -0.15
HCN1O60741 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.11□□□□□ -0.15
HCN1O60741 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
HCN1O60741 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
HCN1O60741 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.11□□□□□ -0.15
HCN1O60741 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.11□□□□□ -0.15
HCN1O60741 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.11□□□□□ -0.15
HCN1O60741 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms