Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RNF13O43567 AC007787.1-201ENST00000588095 1583 ntBASIC13.74□□□□□ -0.21
RNF13O43567 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RNF13O43567 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RNF13O43567 DRD5P1-201ENST00000456605 1438 ntBASIC13.73□□□□□ -0.21
RNF13O43567 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
RNF13O43567 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 VDAC1P7-201ENST00000462417 847 ntBASIC13.73□□□□□ -0.21
RNF13O43567 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF13O43567 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF13O43567 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF13O43567 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.73□□□□□ -0.21
RNF13O43567 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 AC107373.2-201ENST00000607735 490 ntBASIC13.73□□□□□ -0.21
RNF13O43567 AC004790.1-201ENST00000612686 536 ntBASIC13.73□□□□□ -0.21
RNF13O43567 AC009118.2-201ENST00000613275 655 ntBASIC13.73□□□□□ -0.21
RNF13O43567 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 AC018529.2-202ENST00000611482 3087 ntBASIC13.73□□□□□ -0.21
RNF13O43567 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RNF13O43567 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.73□□□□□ -0.21
RNF13O43567 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RNF13O43567 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
RNF13O43567 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 LILRP1-201ENST00000444199 1370 ntBASIC13.72□□□□□ -0.21
RNF13O43567 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.72□□□□□ -0.21
RNF13O43567 MIR770-201ENST00000390219 98 ntBASIC13.72□□□□□ -0.21
RNF13O43567 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RNF13O43567 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.72□□□□□ -0.21
RNF13O43567 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.72□□□□□ -0.21
RNF13O43567 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF13O43567 GAPDHP40-201ENST00000505218 1006 ntBASIC13.72□□□□□ -0.21
RNF13O43567 AC093004.1-201ENST00000508850 424 ntBASIC13.72□□□□□ -0.21
RNF13O43567 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.72□□□□□ -0.21
RNF13O43567 RRP7BP-205ENST00000566851 833 ntBASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms