Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 USE1-206ENST00000595101 1776 ntTSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC087499.6-201ENST00000411576 835 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 ELK1P1-201ENST00000485699 580 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 RN7SL204P-201ENST00000582831 262 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC133539.2-201ENST00000604757 467 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC005252.2-201ENST00000624630 1141 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 AC015802.1-201ENST00000588104 1449 ntBASIC12.11□□□□□ -0.47
SRRM4A7MD48 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SRRM4A7MD48 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.11□□□□□ -0.47
SRRM4A7MD48 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 AC055811.4-201ENST00000624039 1754 ntBASIC12.1□□□□□ -0.47
SRRM4A7MD48 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 EIF3FP3-201ENST00000434851 1086 ntBASIC12.1□□□□□ -0.47
SRRM4A7MD48 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 FAM207CP-201ENST00000443486 507 ntBASIC12.1□□□□□ -0.47
SRRM4A7MD48 BCRP1-201ENST00000444246 691 ntBASIC12.1□□□□□ -0.47
SRRM4A7MD48 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CTBP2P3-201ENST00000585629 1255 ntBASIC12.1□□□□□ -0.47
SRRM4A7MD48 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SRRM4A7MD48 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.1□□□□□ -0.47
SRRM4A7MD48 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms