Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SRRM3A6NNA2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 BNIP3P1-202ENST00000550043 1585 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AL691432.1-201ENST00000596308 1422 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AL031055.1-201ENST00000606362 631 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 RN7SL828P-201ENST00000607615 303 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AC093525.8-201ENST00000624099 1342 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 CNTNAP3P2-201ENST00000617175 3861 ntBASIC15.62■□□□□ 0.09
SRRM3A6NNA2 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.62■□□□□ 0.09
SRRM3A6NNA2 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 MIR1247-201ENST00000408206 136 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 GPAA1P2-201ENST00000417923 928 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 CTBP2P5-201ENST00000454986 1264 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 SPDYE18-201ENST00000510091 1050 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 AC123567.1-201ENST00000548294 1261 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 AC243960.2-201ENST00000600996 747 ntBASIC15.61■□□□□ 0.09
SRRM3A6NNA2 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SRRM3A6NNA2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms