Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AC093525.8-201ENST00000624099 1342 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AC011498.7-201ENST00000624986 2027 ntBASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TCRBV3S1A0A5B6 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 AL080243.2-201ENST00000418783 582 ntBASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 RPL13AP23-201ENST00000480739 586 ntBASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
TCRBV3S1A0A5B6 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 ACTG1P14-201ENST00000446382 1122 ntBASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 KRT18P56-201ENST00000507275 550 ntBASIC14.03□□□□□ -0.16
TCRBV3S1A0A5B6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms