Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AC114271.1-201ENST00000612689 2813 ntBASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 AC068760.1-201ENST00000493579 1953 ntBASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.23□□□□□ -0.29
TRDV1A0A1B0GX56 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC090643.2-201ENST00000623442 2029 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC025048.3-201ENST00000590609 569 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC005702.4-201ENST00000618393 416 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC111170.3-201ENST00000624282 2464 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 MYADML-201ENST00000474610 2147 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 CLK3P2-201ENST00000427566 1453 ntBASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRDV1A0A1B0GX56 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AC215219.1-201ENST00000400706 1817 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 MRPL3P1-201ENST00000400109 1033 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AL592309.1-201ENST00000443127 649 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 FAAHP1-202ENST00000446499 1238 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 TIMM8BP1-201ENST00000452384 211 ntBASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.21□□□□□ -0.29
TRDV1A0A1B0GX56 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms