Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 AC009090.5-201ENST00000624886 2285 ntBASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CCDC187A0A096LP49 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 AC078875.1-201ENST00000431907 724 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 AC104784.1-201ENST00000473096 294 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 SCARNA21-201ENST00000517026 139 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 AC005962.1-201ENST00000584100 773 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MIR4750-201ENST00000584564 56 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 MIR6720-201ENST00000611664 98 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PAUPAR-201ENST00000630360 2965 ntBASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC14.16□□□□□ -0.14
CCDC187A0A096LP49 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 PRAL-201ENST00000624952 3286 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 TLE1P1-201ENST00000422965 589 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 RN7SL181P-201ENST00000462921 277 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 RN7SL555P-201ENST00000584742 339 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 AC073352.2-201ENST00000609385 439 ntBASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.15□□□□□ -0.14
CCDC187A0A096LP49 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms