Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 KRT8P14-201ENST00000414254 1442 ntBASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AL008707.1-201ENST00000422498 534 ntBASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 FAM8A4P-201ENST00000435433 1213 ntBASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AC138627.1-207ENST00000641560 1006 ntBASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PCDHGA9Q9Y5G4 AL137784.3-201ENST00000623858 2288 ntBASIC14.08□□□□□ -0.15
PCDHGA9Q9Y5G4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC015656.1-201ENST00000624209 3578 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 COX5BP1-201ENST00000507622 393 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC079328.1-201ENST00000560358 952 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC007663.3-201ENST00000609632 465 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 ZACNP1-201ENST00000612259 710 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC138649.2-201ENST00000615886 705 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AL645728.2-202ENST00000641679 227 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 CICP23-201ENST00000605013 2741 ntBASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PCDHGA9Q9Y5G4 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.07□□□□□ -0.16
PCDHGA9Q9Y5G4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms