Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AC023824.1-201ENST00000562945 2975 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 AHCYP2-201ENST00000430630 1300 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 FKBP4P6-201ENST00000457486 1332 ntBASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PCDHGC4Q9Y5F7 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AC103702.1-201ENST00000548801 2630 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AC106881.1-201ENST00000605849 3329 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AC099336.1-201ENST00000417053 1171 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 HLA-V-201ENST00000429037 534 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 CSF2RBP1-201ENST00000447905 391 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 OR10B1P-201ENST00000601666 907 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 SALL4P5-201ENST00000419001 1760 ntBASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
PCDHGC4Q9Y5F7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.02
PCDHGC4Q9Y5F7 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC003102.2-201ENST00000589195 1469 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LINC01101-201ENST00000622953 1884 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 AC011840.2-201ENST00000563063 1520 ntBASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
PCDHGC4Q9Y5F7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms