Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.04■□□□□ -0
PCDHB1Q9Y5F3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AL137783.1-201ENST00000623494 1896 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 FAM45BP-202ENST00000592932 1624 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 SF1-209ENST00000433274 2317 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ACKR1-201ENST00000368121 1240 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC006033.1-201ENST00000440505 426 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 FAM86HP-204ENST00000513466 959 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC022616.1-201ENST00000518688 554 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 DUX4L45-201ENST00000566406 1057 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC008687.7-202ENST00000637404 953 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 LINC02228-204ENST00000642115 2962 ntBASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.03■□□□□ -0
PCDHB1Q9Y5F3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AC007292.2-201ENST00000593524 1812 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 RNU1-114P-201ENST00000365297 166 ntBASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.02■□□□□ -0
PCDHB1Q9Y5F3 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.02■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms