Protein–RNA interactions for Protein: Q9Y2Y8

PRG3, Proteoglycan 3, humanhuman

Predicted RBP Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRG3Q9Y2Y8 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AC092506.1-202ENST00000401022 528 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 KLF2P1-201ENST00000447438 1042 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 FGFR3P5-201ENST00000564496 886 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AL805961.1-203ENST00000641078 1258 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 AC006058.4-201ENST00000624016 1670 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 SALL4P5-201ENST00000419001 1760 ntBASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.98■□□□□ 0.15
PRG3Q9Y2Y8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AL008707.1-201ENST00000422498 534 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 RN7SL720P-201ENST00000488178 304 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC005324.6-201ENST00000587972 613 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC132192.2-201ENST00000596206 1147 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC016629.1-201ENST00000596579 586 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 AC244394.1-201ENST00000435000 1665 ntBASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.97■□□□□ 0.15
PRG3Q9Y2Y8 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRG3Q9Y2Y8 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRG3Q9Y2Y8 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PRG3Q9Y2Y8 MROH4P-201ENST00000431302 1578 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms