Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC007431.3-201ENST00000623221 587 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 AC089987.1-201ENST00000551654 2209 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TRAPPC4Q9Y296 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TRAPPC4Q9Y296 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
TRAPPC4Q9Y296 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
TRAPPC4Q9Y296 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.83□□□□□ -0.19
TRAPPC4Q9Y296 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 CR383656.2-201ENST00000548656 2254 ntBASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
TRAPPC4Q9Y296 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 C1QBPP1-201ENST00000400117 770 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 SOCS2P1-201ENST00000417727 557 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC098850.1-201ENST00000419919 790 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 ELK1P1-201ENST00000485699 580 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 AC008494.3-201ENST00000606615 944 ntBASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
TRAPPC4Q9Y296 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms