Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 AC084346.2-201ENST00000607097 949 ntBASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 AC104640.1-201ENST00000562617 2109 ntBASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 TCAF2P1-201ENST00000291129 2421 ntBASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.06■□□□□ 0.32
SYNPO2Q9UMS6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 AC007274.2-201ENST00000421675 662 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 MAGEA5-201ENST00000446757 942 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 NUP210P1-202ENST00000504322 710 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 POU5F1P2-201ENST00000521750 823 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 AC027237.1-201ENST00000560942 655 ntBASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYNPO2Q9UMS6 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC046158.3-201ENST00000624947 2558 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AJ011931.1-201ENST00000618749 2492 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 PDIA3P2-201ENST00000428073 158 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 ST13P19-201ENST00000442505 1124 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC012618.1-201ENST00000461223 412 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 MIR4754-201ENST00000582477 89 ntBASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
SYNPO2Q9UMS6 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYNPO2Q9UMS6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms