Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 HLA-DPA2-205ENST00000433582 733 ntBASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AC063952.3-201ENST00000467756 308 ntBASIC13.71□□□□□ -0.21
DKK4Q9UBT3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AC131206.1-201ENST00000538078 1211 ntBASIC13.71□□□□□ -0.21
DKK4Q9UBT3 RN7SL665P-201ENST00000578793 300 ntBASIC13.71□□□□□ -0.21
DKK4Q9UBT3 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DKK4Q9UBT3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 AC099398.1-201ENST00000567919 2776 ntBASIC13.71□□□□□ -0.22
DKK4Q9UBT3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
DKK4Q9UBT3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC13.7□□□□□ -0.22
DKK4Q9UBT3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AC093826.1-201ENST00000508655 993 ntBASIC13.7□□□□□ -0.22
DKK4Q9UBT3 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SRP14-204ENST00000558720 780 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 ABHD17AP9-201ENST00000561925 548 ntBASIC13.7□□□□□ -0.22
DKK4Q9UBT3 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 AC092127.1-201ENST00000567093 3455 ntBASIC13.7□□□□□ -0.22
DKK4Q9UBT3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC13.7□□□□□ -0.22
DKK4Q9UBT3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 TEKT4P2-202ENST00000559466 1312 ntBASIC13.69□□□□□ -0.22
DKK4Q9UBT3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 AC025183.3-201ENST00000623526 1482 ntBASIC13.69□□□□□ -0.22
DKK4Q9UBT3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.69□□□□□ -0.22
DKK4Q9UBT3 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms