Protein–RNA interactions for Protein: Q9NP64

ZCCHC17, Nucleolar protein of 40 kDa, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC17Q9NP64 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 FAM58BP-201ENST00000439056 645 ntBASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 AC104073.2-201ENST00000453737 312 ntBASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 AC020922.3-201ENST00000595064 547 ntBASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 COX6A1P2-201ENST00000620597 330 ntBASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
ZCCHC17Q9NP64 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 AC098935.1-201ENST00000446057 611 ntBASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 DUX4L47-201ENST00000566374 394 ntBASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 AP005117.1-202ENST00000581724 1908 ntBASIC17.55■□□□□ 0.4
ZCCHC17Q9NP64 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 NOC2LP1-201ENST00000450578 752 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 CEP164P1-201ENST00000455142 418 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 AC103988.2-201ENST00000561804 725 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 AC090164.2-201ENST00000611487 516 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 AC103691.2-201ENST00000618824 433 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 AC011491.1-203ENST00000637688 543 ntBASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
ZCCHC17Q9NP64 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms