Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 AC106886.1-201ENST00000568660 600 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 AL162274.1-201ENST00000617191 1098 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 AC018665.1-201ENST00000622927 1362 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 REXO1L5P-201ENST00000622260 2098 ntBASIC12.9□□□□□ -0.34
GCM1Q9NP62 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
GCM1Q9NP62 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
GCM1Q9NP62 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GCM1Q9NP62 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.9□□□□□ -0.35
GCM1Q9NP62 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.35
GCM1Q9NP62 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 AL157414.3-201ENST00000624276 1954 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 AC023157.3-201ENST00000619086 2088 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 U91328.1-201ENST00000437528 223 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 BCRP2-202ENST00000447763 634 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 BCRP6-201ENST00000510112 632 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 BCRP7-201ENST00000511549 544 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.89□□□□□ -0.35
GCM1Q9NP62 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
GCM1Q9NP62 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
GCM1Q9NP62 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms