Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AC023090.2-201ENST00000625182 2110 ntBASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
NEUROD4Q9HD90 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 CU639417.3-201ENST00000624240 1404 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 AL391825.1-201ENST00000457671 1364 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 AL139094.1-201ENST00000405549 1188 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 SOCS2P1-201ENST00000417727 557 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 DFFBP1-201ENST00000433250 979 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ATP5G2P4-201ENST00000442175 420 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NEUROD4Q9HD90 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 COX5BP8-201ENST00000416911 349 ntBASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NEUROD4Q9HD90 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms