Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 KRT43P-201ENST00000434019 910 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 GAPDHP21-201ENST00000450301 1010 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AL022328.1-201ENST00000610050 478 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 AL359258.3-201ENST00000622910 2331 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 PEG13-201ENST00000631594 5667 ntBASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CDH20Q9HBT6 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ZBED1P1-201ENST00000502364 1930 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC091951.1-201ENST00000512854 2465 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC063926.2-201ENST00000623766 1308 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 ACTBP8-201ENST00000403258 1108 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 SLC25A47P1-201ENST00000531577 414 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC008735.3-201ENST00000596646 500 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 AC233724.13-201ENST00000598383 410 ntBASIC13.19□□□□□ -0.3
CDH20Q9HBT6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CDH20Q9HBT6 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms