Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UPK3BQ9BT76 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC114812.1-204ENST00000449669 728 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC022210.1-201ENST00000449856 793 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AP001582.1-201ENST00000525856 295 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC013268.4-201ENST00000637413 2228 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC010327.5-201ENST00000586923 3061 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC009090.5-201ENST00000624886 2285 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 AC093525.8-201ENST00000624099 1342 ntBASIC10.55□□□□□ -0.72
UPK3BQ9BT76 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
UPK3BQ9BT76 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AC092933.1-201ENST00000393644 945 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ACTBP8-201ENST00000403258 1108 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 C2orf27AP3-201ENST00000434123 579 ntBASIC10.54□□□□□ -0.72
UPK3BQ9BT76 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.54□□□□□ -0.72
UPK3BQ9BT76 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms