Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 RPL37AP1-201ENST00000412502 279 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 CEND1P1-201ENST00000451006 455 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 SERBP1P3-201ENST00000459980 809 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AC004066.1-201ENST00000502488 802 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AL512361.1-201ENST00000554200 418 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AL513210.1-201ENST00000629608 234 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AC020910.6-201ENST00000623084 1459 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 AC067750.1-201ENST00000608826 6545 ntBASIC14.67□□□□□ -0.06
EBF4Q9BQW3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.67□□□□□ -0.06
EBF4Q9BQW3 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 MIR940-201ENST00000401276 94 ntBASIC14.66□□□□□ -0.06
EBF4Q9BQW3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC004832.2-201ENST00000426397 482 ntBASIC14.66□□□□□ -0.06
EBF4Q9BQW3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TPM4P1-201ENST00000436100 807 ntBASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 MIR6080-201ENST00000617359 66 ntBASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.66□□□□□ -0.06
EBF4Q9BQW3 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.65□□□□□ -0.06
EBF4Q9BQW3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms