Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.39□□□□□ -0.27
VRK1Q99986 HNRNPUP1-201ENST00000554987 333 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 RAB43P1-201ENST00000561790 589 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.39□□□□□ -0.27
VRK1Q99986 AC017083.2-201ENST00000608069 979 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 MROH4P-201ENST00000431302 1578 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 AL607033.1-201ENST00000623900 1599 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 AC010327.5-201ENST00000586923 3061 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.39□□□□□ -0.27
VRK1Q99986 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.39□□□□□ -0.27
VRK1Q99986 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.39□□□□□ -0.27
VRK1Q99986 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VRK1Q99986 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
VRK1Q99986 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
VRK1Q99986 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.38□□□□□ -0.27
VRK1Q99986 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.38□□□□□ -0.27
VRK1Q99986 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 KRT17P8-201ENST00000540749 863 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 IFT20-216ENST00000588477 774 ntTSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
VRK1Q99986 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
VRK1Q99986 AC090616.6-203ENST00000579186 1945 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 FGD5P1-202ENST00000614866 2498 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 CR383656.2-201ENST00000548656 2254 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 KRT8P22-201ENST00000562317 1415 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 AC112693.3-201ENST00000624819 1983 ntBASIC13.38□□□□□ -0.27
VRK1Q99986 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.38□□□□□ -0.27
VRK1Q99986 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VRK1Q99986 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
VRK1Q99986 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.37□□□□□ -0.27
VRK1Q99986 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
VRK1Q99986 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VRK1Q99986 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.37□□□□□ -0.27
VRK1Q99986 C18orf15-201ENST00000623680 2534 ntBASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms