Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 CYP2T1P-202ENST00000641596 2535 ntBASIC16.86■□□□□ 0.29
PTPN18Q99952 RPL35P9-201ENST00000446059 350 ntBASIC16.86■□□□□ 0.29
PTPN18Q99952 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC16.86■□□□□ 0.29
PTPN18Q99952 FAM86B3P-203ENST00000523992 854 ntBASIC16.86■□□□□ 0.29
PTPN18Q99952 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
PTPN18Q99952 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN18Q99952 MIR2392-201ENST00000584881 84 ntBASIC16.86■□□□□ 0.29
PTPN18Q99952 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN18Q99952 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
PTPN18Q99952 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN18Q99952 KRT8P28-201ENST00000433288 1390 ntBASIC16.86■□□□□ 0.29
PTPN18Q99952 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PTPN18Q99952 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN18Q99952 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN18Q99952 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 RN7SKP109-201ENST00000410592 316 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 ACTBP7-201ENST00000418351 1124 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN18Q99952 RPL18AP8-201ENST00000486071 528 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 PPIA-208ENST00000489459 907 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 PGAM1P12-201ENST00000505622 748 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN18Q99952 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN18Q99952 AC140113.1-201ENST00000603467 169 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 PPIA-210ENST00000620047 827 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN18Q99952 AC002044.2-201ENST00000624910 970 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTPN18Q99952 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 AP005117.1-202ENST00000581724 1908 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN18Q99952 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN18Q99952 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 AC021305.1-201ENST00000520656 1514 ntBASIC16.85■□□□□ 0.29
PTPN18Q99952 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN18Q99952 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN18Q99952 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 COX20P1-201ENST00000366529 357 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 AC073869.2-201ENST00000417338 1026 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN18Q99952 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.84■□□□□ 0.29
PTPN18Q99952 KRT8P1-201ENST00000557533 1207 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN18Q99952 RN7SL357P-201ENST00000581065 298 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
PTPN18Q99952 AC018695.6-201ENST00000614011 534 ntBASIC16.84■□□□□ 0.29
PTPN18Q99952 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms