Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.13■□□□□ 0.01
NOTCH4Q99466 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NOTCH4Q99466 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.13■□□□□ 0.01
NOTCH4Q99466 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
NOTCH4Q99466 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 MARK2P16-201ENST00000605714 1723 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC073869.2-201ENST00000417338 1026 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 OR8T1P-201ENST00000421347 918 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 LINC01815-202ENST00000641468 1409 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 RPL7P35-201ENST00000446943 740 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 KRT18P66-201ENST00000452970 1269 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC026410.1-201ENST00000507366 1101 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 HLA-C-210ENST00000640219 976 ntBASIC15.12■□□□□ 0.01
NOTCH4Q99466 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
NOTCH4Q99466 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
NOTCH4Q99466 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AGAP7P-201ENST00000582299 2062 ntBASIC15.11■□□□□ 0.01
NOTCH4Q99466 AGAP14-201ENST00000624701 2060 ntBASIC15.11■□□□□ 0.01
NOTCH4Q99466 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.11■□□□□ 0.01
NOTCH4Q99466 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
NOTCH4Q99466 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms