Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 DUX4L46-201ENST00000566845 751 ntBASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 AL023803.2-201ENST00000620080 638 ntBASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC85AQ96PX6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 NORAD-201ENST00000565493 5339 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC244394.1-201ENST00000435000 1665 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AK6-201ENST00000380818 1183 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 MIR769-201ENST00000390225 118 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 CMC1-204ENST00000423894 549 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 UPF3AP2-201ENST00000457924 1132 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 CDC23-208ENST00000505120 455 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC079328.1-201ENST00000560358 952 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC013355.1-201ENST00000562625 723 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 AC026740.1-201ENST00000607068 791 ntBASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC85AQ96PX6 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AC013268.4-201ENST00000637413 2228 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AC010141.1-201ENST00000411585 623 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AC106794.1-201ENST00000506935 792 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 RN7SL163P-201ENST00000583100 276 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AC068587.8-201ENST00000641239 219 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 CICP23-201ENST00000605013 2741 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 AC008132.1-202ENST00000342005 1389 ntBASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CCDC85AQ96PX6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CCDC85AQ96PX6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms