Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
IFT43Q96FT9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
IFT43Q96FT9 INTS4P2-202ENST00000614726 2019 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 MIR658-201ENST00000385210 100 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 AC026410.3-201ENST00000514280 936 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 SAMD11P1-201ENST00000571429 661 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 BTNL10-201ENST00000595971 695 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 AC012508.2-201ENST00000567613 1472 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 AC010327.5-201ENST00000586923 3061 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 SBF1P1-201ENST00000444527 5631 ntBASIC15.56■□□□□ 0.08
IFT43Q96FT9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
IFT43Q96FT9 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
IFT43Q96FT9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AGAP7P-201ENST00000582299 2062 ntBASIC15.55■□□□□ 0.08
IFT43Q96FT9 AGAP14-201ENST00000624701 2060 ntBASIC15.55■□□□□ 0.08
IFT43Q96FT9 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ACTG1P3-201ENST00000431775 1114 ntBASIC15.55■□□□□ 0.08
IFT43Q96FT9 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.55■□□□□ 0.08
IFT43Q96FT9 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms