Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM11Q96F44 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM11Q96F44 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM11Q96F44 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRIM11Q96F44 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.92■□□□□ 0.14
TRIM11Q96F44 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 AC007969.1-201ENST00000433675 447 ntBASIC15.91■□□□□ 0.14
TRIM11Q96F44 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 AC026434.2-201ENST00000506094 1078 ntBASIC15.91■□□□□ 0.14
TRIM11Q96F44 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.91■□□□□ 0.14
TRIM11Q96F44 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 AP001063.1-201ENST00000568332 529 ntBASIC15.91■□□□□ 0.14
TRIM11Q96F44 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TRIM11Q96F44 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TRIM11Q96F44 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AC098850.1-201ENST00000419919 790 ntBASIC15.9■□□□□ 0.14
TRIM11Q96F44 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 AC005252.2-201ENST00000624630 1141 ntBASIC15.9■□□□□ 0.14
TRIM11Q96F44 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TRIM11Q96F44 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.9■□□□□ 0.14
TRIM11Q96F44 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms