Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.73□□□□□ -0.37
RTN4IP1Q8WWV3 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC079781.5-202ENST00000641784 3743 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC015922.1-201ENST00000421102 1152 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 TSSK5P-201ENST00000423978 907 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RPL13P2-201ENST00000440687 659 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RFPL4AP1-201ENST00000530883 850 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC044860.1-202ENST00000559481 777 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.72□□□□□ -0.37
RTN4IP1Q8WWV3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms