Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC107Q8WV48 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.1□□□□□ -0.31
CCDC107Q8WV48 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC107Q8WV48 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CCDC107Q8WV48 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AL035456.1-201ENST00000456064 1369 ntBASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 SNHG9-202ENST00000564014 471 ntBASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AL589739.1-201ENST00000607720 493 ntBASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCDC107Q8WV48 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 KRT8P12-202ENST00000472924 1397 ntBASIC13.08□□□□□ -0.31
CCDC107Q8WV48 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CCDC107Q8WV48 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SPDYE17-201ENST00000412399 783 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SPDYE7P-202ENST00000420373 878 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CNN2P11-201ENST00000429351 262 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 HIST3H2BA-201ENST00000436555 524 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AL079307.3-201ENST00000556114 283 ntBASIC13.08□□□□□ -0.32
CCDC107Q8WV48 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCDC107Q8WV48 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms