Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC026954.1-201ENST00000429771 1293 ntBASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 EIF3FP3-201ENST00000434851 1086 ntBASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CSF2RBP1-201ENST00000447905 391 ntBASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 ECM1P1-201ENST00000604092 1279 ntBASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
FNDC9Q8TBE3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AL109954.1-202ENST00000564051 2148 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 TPM3P8-201ENST00000330554 643 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 RNA5SP486-201ENST00000515961 83 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC079316.1-201ENST00000548397 411 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 RN7SL48P-201ENST00000579283 293 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.57□□□□□ -0.24
FNDC9Q8TBE3 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms