Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
TMEFF1Q8IYR6 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 TBC1D3J-201ENST00000620719 1426 ntBASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 VDAC1P1-201ENST00000439229 848 ntBASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 COX6A1P2-201ENST00000620597 330 ntBASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AL008718.2-201ENST00000609206 1313 ntBASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 AC105250.1-201ENST00000509378 2057 ntBASIC14.85□□□□□ -0.03
TMEFF1Q8IYR6 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC026316.1-201ENST00000398900 414 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC012441.2-201ENST00000444843 739 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC098935.1-201ENST00000446057 611 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 RN7SL181P-201ENST00000462921 277 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 SCARNA21-201ENST00000517026 139 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 NEU3-205ENST00000531619 582 ntTSL 5 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC132192.2-201ENST00000596206 1147 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 RN7SL736P-201ENST00000613111 269 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 AC011491.1-203ENST00000637688 543 ntBASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TMEFF1Q8IYR6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms