Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 AL160191.2-201ENST00000603975 601 ntBASIC20.58■□□□□ 0.88
UBR1Q8IWV7 AC021016.3-201ENST00000608367 477 ntBASIC20.58■□□□□ 0.88
UBR1Q8IWV7 AL021707.6-201ENST00000609212 491 ntBASIC20.58■□□□□ 0.88
UBR1Q8IWV7 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBR1Q8IWV7 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBR1Q8IWV7 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBR1Q8IWV7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBR1Q8IWV7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SAT1-201ENST00000379251 801 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SAT1-202ENST00000379253 909 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SAT1-203ENST00000379254 868 ntTSL 3 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 BAX-205ENST00000391871 687 ntTSL 5 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 OR52M2P-201ENST00000414298 959 ntBASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 GRPEL2P1-201ENST00000453145 339 ntBASIC20.57■□□□□ 0.88
UBR1Q8IWV7 RN7SL147P-201ENST00000487345 298 ntBASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC20.57■□□□□ 0.88
UBR1Q8IWV7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 PCDHA1-201ENST00000378133 2726 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 AC008026.2-201ENST00000495438 348 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 CMC2-204ENST00000562713 573 ntTSL 3 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 CMC2-209ENST00000565108 399 ntTSL 2 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 RN7SL556P-201ENST00000582856 298 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 AC090510.3-201ENST00000615831 821 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 TNNT1-202ENST00000356783 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 KRT18P4-201ENST00000422599 1288 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 NAV1-210ENST00000593583 726 ntBASIC20.56■□□□□ 0.88
UBR1Q8IWV7 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC20.56■□□□□ 0.88
UBR1Q8IWV7 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 ODCP-201ENST00000459650 1639 ntBASIC20.55■□□□□ 0.88
UBR1Q8IWV7 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBR1Q8IWV7 AC022080.1-201ENST00000366255 781 ntBASIC20.55■□□□□ 0.88
UBR1Q8IWV7 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms