Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.03■□□□□ -0
APLFQ8IW19 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.03■□□□□ -0
APLFQ8IW19 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.03■□□□□ -0
APLFQ8IW19 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.03■□□□□ -0
APLFQ8IW19 AC004461.2-201ENST00000629517 803 ntBASIC15.03■□□□□ -0
APLFQ8IW19 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC15.03■□□□□ -0
APLFQ8IW19 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
APLFQ8IW19 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
APLFQ8IW19 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.02■□□□□ -0
APLFQ8IW19 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
APLFQ8IW19 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC15.02■□□□□ -0
APLFQ8IW19 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.02■□□□□ -0
APLFQ8IW19 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.02■□□□□ -0
APLFQ8IW19 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.02■□□□□ -0
APLFQ8IW19 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.02■□□□□ -0
APLFQ8IW19 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.02■□□□□ -0
APLFQ8IW19 RPS2P32-201ENST00000439199 892 ntBASIC15.02■□□□□ -0
APLFQ8IW19 AL139010.1-201ENST00000454878 894 ntBASIC15.02■□□□□ -0
APLFQ8IW19 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.02■□□□□ -0
APLFQ8IW19 KRT17P8-201ENST00000540749 863 ntBASIC15.02■□□□□ -0
APLFQ8IW19 RAB43P1-201ENST00000561790 589 ntBASIC15.02■□□□□ -0
APLFQ8IW19 RRP7BP-205ENST00000566851 833 ntBASIC15.02■□□□□ -0
APLFQ8IW19 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.02■□□□□ -0
APLFQ8IW19 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
APLFQ8IW19 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
APLFQ8IW19 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.02■□□□□ -0
APLFQ8IW19 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.02□□□□□ -0.01
APLFQ8IW19 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.02□□□□□ -0.01
APLFQ8IW19 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
APLFQ8IW19 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
APLFQ8IW19 ZBED1P1-201ENST00000502364 1930 ntBASIC15.02□□□□□ -0.01
APLFQ8IW19 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.02□□□□□ -0.01
APLFQ8IW19 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.01□□□□□ -0.01
APLFQ8IW19 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.01□□□□□ -0.01
APLFQ8IW19 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
APLFQ8IW19 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
APLFQ8IW19 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms