Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AP001160.2-201ENST00000596071 487 ntBASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 LILRP1-201ENST00000444199 1370 ntBASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CCDC50Q8IVM0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AC004066.1-201ENST00000502488 802 ntBASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AL390754.1-201ENST00000619088 582 ntBASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AL158212.4-201ENST00000624062 1286 ntBASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CCDC50Q8IVM0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 MBLAC2-202ENST00000514906 1936 ntBASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
CCDC50Q8IVM0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 AC018442.1-201ENST00000421439 2061 ntBASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 AC114501.2-201ENST00000439631 535 ntBASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 AC092337.1-201ENST00000568699 1129 ntBASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.95■□□□□ 0.14
CCDC50Q8IVM0 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms