Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
VRK2Q86Y07 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
VRK2Q86Y07 AL354702.1-201ENST00000442006 1960 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC027601.5-201ENST00000624065 2482 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 SOCS2P1-201ENST00000417727 557 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 TSPY16P-201ENST00000449843 468 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 DUX4L47-201ENST00000566374 394 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
VRK2Q86Y07 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VRK2Q86Y07 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VRK2Q86Y07 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC055811.4-201ENST00000624039 1754 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC015802.1-201ENST00000588104 1449 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 MIR661-201ENST00000384842 89 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 KLF2P2-201ENST00000416807 1039 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 MYCLP2-201ENST00000449268 967 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC026434.2-201ENST00000506094 1078 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AC004233.3-201ENST00000607794 1269 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AJ011932.1-201ENST00000621707 465 ntBASIC13.91□□□□□ -0.18
VRK2Q86Y07 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.91□□□□□ -0.18
VRK2Q86Y07 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VRK2Q86Y07 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms