Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AC138701.2-201ENST00000553634 226 ntBASIC10.17□□□□□ -0.78
CSMD3Q7Z407 HMGB1P24-201ENST00000611897 328 ntBASIC10.17□□□□□ -0.78
CSMD3Q7Z407 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CASK-202ENST00000378158 3848 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 PTPA-215ENST00000432124 567 ntTSL 4 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 ELP5-212ENST00000574255 671 ntTSL 2 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.17□□□□□ -0.78
CSMD3Q7Z407 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 CELP-201ENST00000411440 1249 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC092862.1-201ENST00000541534 533 ntBASIC10.16□□□□□ -0.78
CSMD3Q7Z407 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AP002353.1-201ENST00000528257 1599 ntBASIC10.16□□□□□ -0.78
CSMD3Q7Z407 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 LILRP1-201ENST00000444199 1370 ntBASIC10.16□□□□□ -0.78
CSMD3Q7Z407 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 KHSRPP1-201ENST00000427983 1768 ntBASIC10.16□□□□□ -0.78
CSMD3Q7Z407 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SALL4P5-201ENST00000419001 1760 ntBASIC10.16□□□□□ -0.78
CSMD3Q7Z407 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
CSMD3Q7Z407 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms