Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NUP54Q7Z3B4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AC112492.5-201ENST00000421897 457 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 EIF3FP3-201ENST00000434851 1086 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AC234783.1-201ENST00000441761 496 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 FTH1P14-201ENST00000482930 551 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 ACE3P-201ENST00000423435 1973 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 AL138709.1-201ENST00000614840 1693 ntBASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NUP54Q7Z3B4 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 FGD5P1-202ENST00000614866 2498 ntBASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 GNRHR2-203ENST00000581100 1187 ntBASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 AL512343.1-201ENST00000605837 169 ntBASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 AL137783.1-201ENST00000623494 1896 ntBASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NUP54Q7Z3B4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms