Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TSSK5P-201ENST00000423978 907 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 UGT1A2P-201ENST00000454886 866 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 RN7SL618P-201ENST00000477850 296 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 INO80C-206ENST00000586489 594 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.98□□□□□ -0.17
TUBA1AQ71U36 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.98□□□□□ -0.17
TUBA1AQ71U36 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 SPDYE17-201ENST00000412399 783 ntBASIC13.97□□□□□ -0.17
TUBA1AQ71U36 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 BCRP1-201ENST00000444246 691 ntBASIC13.97□□□□□ -0.17
TUBA1AQ71U36 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms