Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 EMD-201ENST00000369835 966 ntTSL 3 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SAPCD2P3-201ENST00000455031 850 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SLIT2-204ENST00000504154 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AC006557.2-201ENST00000592985 1240 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AC064862.7-201ENST00000604520 867 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 MIR1199-201ENST00000621445 119 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AL691432.3-201ENST00000621860 400 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AC004241.5-201ENST00000623870 2448 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AP000845.1-201ENST00000581677 2131 ntBASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 PCF11-201ENST00000298281 7677 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
KCNIP4Q6PIL6 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AC131902.2-201ENST00000566892 2172 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GHSR-202ENST00000427970 912 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GPX1P2-201ENST00000429271 606 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 KRT18P56-201ENST00000507275 550 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AC022447.6-201ENST00000515522 438 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 AP001269.4-201ENST00000609611 512 ntBASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
KCNIP4Q6PIL6 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
KCNIP4Q6PIL6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 TCAM1P-207ENST00000485295 1537 ntBASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 INE2-201ENST00000630399 1874 ntBASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
KCNIP4Q6PIL6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.7□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms