Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.91■□□□□ 0.14
VARS2Q5ST30 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 AC003102.2-201ENST00000589195 1469 ntBASIC15.91■□□□□ 0.14
VARS2Q5ST30 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
VARS2Q5ST30 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 HINT2P1-201ENST00000419438 481 ntBASIC15.9■□□□□ 0.14
VARS2Q5ST30 AC073310.1-201ENST00000423226 1033 ntBASIC15.9■□□□□ 0.14
VARS2Q5ST30 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 NDUFV2P1-201ENST00000596415 907 ntBASIC15.9■□□□□ 0.14
VARS2Q5ST30 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC15.9■□□□□ 0.14
VARS2Q5ST30 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
VARS2Q5ST30 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
VARS2Q5ST30 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 E2F3P2-201ENST00000447755 1422 ntBASIC15.89■□□□□ 0.13
VARS2Q5ST30 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 TRMT13-201ENST00000370139 711 ntTSL 3 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 AL662890.1-201ENST00000396818 632 ntBASIC15.89■□□□□ 0.13
VARS2Q5ST30 AC010141.1-201ENST00000411585 623 ntBASIC15.89■□□□□ 0.13
VARS2Q5ST30 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 MIR4722-201ENST00000578292 60 ntBASIC15.89■□□□□ 0.13
VARS2Q5ST30 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 BNIP3P13-201ENST00000599968 566 ntBASIC15.89■□□□□ 0.13
VARS2Q5ST30 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 METTL15-211ENST00000634762 718 ntTSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
VARS2Q5ST30 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.89■□□□□ 0.13
VARS2Q5ST30 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
VARS2Q5ST30 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms