Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
KHDC1Q4VXA5 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 RPL13AP25-201ENST00000484130 612 ntBASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 AC005252.2-201ENST00000624630 1141 ntBASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.27■□□□□ 0.04
KHDC1Q4VXA5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 DGCR9-201ENST00000609630 2415 ntBASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
KHDC1Q4VXA5 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 RPL5P21-201ENST00000404620 815 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SOCS2P1-201ENST00000417727 557 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 TMEM14DP-201ENST00000422205 345 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CLUHP6-201ENST00000580789 941 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CU634019.7-201ENST00000624153 1185 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 FP236241.2-201ENST00000624906 1185 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 AL358472.5-202ENST00000641448 1267 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 CU639417.3-201ENST00000624240 1404 ntBASIC15.26■□□□□ 0.03
KHDC1Q4VXA5 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 AL138799.1-201ENST00000448213 1675 ntBASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
KHDC1Q4VXA5 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms