Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 AC005912.2-201ENST00000619492 2400 ntBASIC19.43■□□□□ 0.7
CCDC27Q2M243 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC27Q2M243 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC27Q2M243 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 MYADML-201ENST00000474610 2147 ntBASIC19.42■□□□□ 0.7
CCDC27Q2M243 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 KRT223P-202ENST00000449164 1292 ntBASIC19.42■□□□□ 0.7
CCDC27Q2M243 HOMER2P2-201ENST00000451621 847 ntBASIC19.42■□□□□ 0.7
CCDC27Q2M243 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 RNA5SP412-201ENST00000516234 123 ntBASIC19.42■□□□□ 0.7
CCDC27Q2M243 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 ING5-213ENST00000636051 4199 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC27Q2M243 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC27Q2M243 KRT8P4-201ENST00000509735 1454 ntBASIC19.41■□□□□ 0.7
CCDC27Q2M243 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 HIST2H2BB-201ENST00000449108 381 ntBASIC19.41■□□□□ 0.7
CCDC27Q2M243 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 HNRNPA1P48-202ENST00000565308 961 ntBASIC19.41■□□□□ 0.7
CCDC27Q2M243 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 AC133552.6-201ENST00000613406 534 ntBASIC19.41■□□□□ 0.7
CCDC27Q2M243 AC007191.1-201ENST00000623179 2995 ntBASIC19.41■□□□□ 0.7
CCDC27Q2M243 MVK-217ENST00000639206 367 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC27Q2M243 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC27Q2M243 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC27Q2M243 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC27Q2M243 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms