Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC19.45■□□□□ 0.7
COL16A1Q07092 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL16A1Q07092 LINC00528-201ENST00000600723 2160 ntBASIC19.45■□□□□ 0.7
COL16A1Q07092 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL16A1Q07092 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC19.45■□□□□ 0.7
COL16A1Q07092 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL16A1Q07092 CICP13-201ENST00000422015 2789 ntBASIC19.45■□□□□ 0.7
COL16A1Q07092 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
COL16A1Q07092 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.45■□□□□ 0.7
COL16A1Q07092 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 KRT8P6-201ENST00000399259 1207 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 LINP1-201ENST00000417112 917 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 HNRNPA1P21-201ENST00000424115 961 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 AL773545.2-201ENST00000442149 472 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC19.44■□□□□ 0.7
COL16A1Q07092 AC026412.1-206ENST00000502273 206 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 PRSS3P1-201ENST00000503996 742 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC19.44■□□□□ 0.7
COL16A1Q07092 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 AC016582.2-202ENST00000587765 1094 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 AC020931.1-201ENST00000589622 1346 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC19.44■□□□□ 0.7
COL16A1Q07092 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC19.44■□□□□ 0.7
COL16A1Q07092 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC19.44■□□□□ 0.7
COL16A1Q07092 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
COL16A1Q07092 AL137077.2-201ENST00000635124 1608 ntBASIC19.44■□□□□ 0.7
COL16A1Q07092 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 U73169.1-201ENST00000395152 367 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC19.43■□□□□ 0.7
COL16A1Q07092 KRT18P62-201ENST00000446618 1287 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 RN7SKP155-201ENST00000516031 288 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC19.43■□□□□ 0.7
COL16A1Q07092 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC19.43■□□□□ 0.7
COL16A1Q07092 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC19.43■□□□□ 0.7
COL16A1Q07092 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC19.43■□□□□ 0.7
COL16A1Q07092 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
COL16A1Q07092 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC19.43■□□□□ 0.7
COL16A1Q07092 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 BX088651.3-201ENST00000418155 352 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 RN7SL440P-201ENST00000577855 343 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC19.43■□□□□ 0.7
COL16A1Q07092 AL009176.1-201ENST00000607876 650 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
COL16A1Q07092 KRT8P18-201ENST00000413425 1445 ntBASIC19.43■□□□□ 0.7
COL16A1Q07092 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.42■□□□□ 0.7
COL16A1Q07092 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC19.42■□□□□ 0.7
COL16A1Q07092 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
COL16A1Q07092 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.42■□□□□ 0.7
COL16A1Q07092 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 SPATS1-202ENST00000323108 1107 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
COL16A1Q07092 AC092573.1-201ENST00000433054 884 ntBASIC19.42■□□□□ 0.7
COL16A1Q07092 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC19.42■□□□□ 0.7
COL16A1Q07092 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC19.42■□□□□ 0.7
COL16A1Q07092 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC19.42■□□□□ 0.7
COL16A1Q07092 AP000920.1-201ENST00000531824 344 ntBASIC19.42■□□□□ 0.7
COL16A1Q07092 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC19.42■□□□□ 0.7
COL16A1Q07092 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
COL16A1Q07092 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC19.42■□□□□ 0.7
COL16A1Q07092 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.42■□□□□ 0.7
COL16A1Q07092 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms